Figured id post my findings on my water leaks. I too had water on the drivers side rear storage compartment.
My sunroof needed to be adjusted cause one side went down too far and let too much water in for the drains to handle.
The driverside sun roof drain would not let water out unless you poked at it between the bed where it come out. I snipped a small piece off with a scissor.
Now the rear power window would fill and not drain. I found the drains! Their about 6.5"'s from the windows end. I took a small straw which fit inside my air gun and blew in the track under the cable, this is where the drains are. You will be able to here the air rushing outside. I also black siliconed the bottom corners of the exterior seal which let less water in.
I am now leak free